Stem-loop sequence hsa-mir-521-1

Accession MI0003176
Symbol HGNC:MIR521-1
Description Homo sapiens miR-521-1 stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
     g  u     c   c         aa u    guug  u 
ucuca gc gugac cuc aaagggaag  c uucu    uc a
||||| || ||||| ||| |||||||||  | ||||    || a
agagu ug cauug gag uuucccuuc  g aaga    ag a
     g  c     u   a         ac c    --aa  a
Get sequence
Deep sequencing
5 reads, 3 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr19: 54251890-54251976 [+]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-521-1
hsa-mir-518a-2 chr19: 54242587-54242673 [+]
hsa-mir-517c chr19: 54244567-54244661 [+]
hsa-mir-520h chr19: 54245766-54245853 [+]
hsa-mir-521-1 chr19: 54251890-54251976 [+]
hsa-mir-522 chr19: 54254465-54254551 [+]
hsa-mir-519a-1 chr19: 54255651-54255735 [+]
hsa-mir-527 chr19: 54257272-54257356 [+]
hsa-mir-516a-1 chr19: 54259995-54260084 [+]
hsa-mir-1283-2 chr19: 54261486-54261572 [+]
Database links

Mature sequence hsa-miR-521

Accession MIMAT0002854
Sequence

54 -  

aacgcacuucccuuuagagugu

 - 75

Get sequence
Deep sequencing 8 reads, 2 experiments
Evidence experimental; array-cloned [1], cloned [2]
Validated targets
Predicted targets

References

1
PMID:15965474 "Identification of hundreds of conserved and nonconserved human microRNAs" Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z Nat Genet. 37:766-770(2005).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).