Stem-loop sequence hsa-mir-519d

Accession MI0003162
Symbol HGNC:MIR519D
Description Homo sapiens miR-519d stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
     u  u     c   c       a      uc      uuu 
uccca gc gugac cuc aaaggga gcgcuu  uguuug   u
||||| || ||||| ||| ||||||| ||||||  ||||||    
agggu ug cauug gag uuucccu cgugaa  acaaau   c
     u  c     u   a       c      --      ucu
Get sequence
Deep sequencing
47 reads, 6 experiments
Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr19: 54216601-54216688 [+]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-519d
hsa-mir-526a-1 chr19: 54209506-54209590 [+]
hsa-mir-520c chr19: 54210707-54210793 [+]
hsa-mir-518c chr19: 54211989-54212089 [+]
hsa-mir-524 chr19: 54214256-54214342 [+]
hsa-mir-517a chr19: 54215522-54215608 [+]
hsa-mir-519d chr19: 54216601-54216688 [+]
hsa-mir-521-2 chr19: 54219848-54219934 [+]
hsa-mir-520d chr19: 54223350-54223436 [+]
hsa-mir-517b chr19: 54224330-54224396 [+]
hsa-mir-520g chr19: 54225420-54225509 [+]
Database links

Mature sequence hsa-miR-519d

Accession MIMAT0002853
Sequence

54 -  

caaagugccucccuuuagagug

 - 75

Get sequence
Deep sequencing 47 reads, 6 experiments
Evidence experimental; array-cloned [1], cloned [2]
Validated targets
Predicted targets

References

1
PMID:15965474 "Identification of hundreds of conserved and nonconserved human microRNAs" Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z Nat Genet. 37:766-770(2005).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).