Stem-loop sequence hsa-mir-518c

Accession MI0003159
Symbol HGNC:MIR518C
Description Homo sapiens miR-518c stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
gcgagaaga     u        u              a   uc    g  u 
         ucuca gcugugac cucuggagggaagc cuu  uguu uc g
         ||||| |||||||| |||||||||||||| |||  |||| || a
         agagu uggcauug gagauuucucuucg gaa  acaa ag a
----cgaaa     u        u              c   --    a  a
Get sequence
Deep sequencing
15 reads, 4 experiments
Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr19: 54211989-54212089 [+]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-518c
hsa-mir-518f chr19: 54203269-54203355 [+]
hsa-mir-520b chr19: 54204481-54204541 [+]
hsa-mir-518b chr19: 54205991-54206073 [+]
hsa-mir-526a-1 chr19: 54209506-54209590 [+]
hsa-mir-520c chr19: 54210707-54210793 [+]
hsa-mir-518c chr19: 54211989-54212089 [+]
hsa-mir-524 chr19: 54214256-54214342 [+]
hsa-mir-517a chr19: 54215522-54215608 [+]
hsa-mir-519d chr19: 54216601-54216688 [+]
hsa-mir-521-2 chr19: 54219848-54219934 [+]
Database links

Mature sequence hsa-miR-518c-5p

Accession MIMAT0002847
Previous IDs hsa-miR-518c*
Sequence

24 -  

ucucuggagggaagcacuuucug

 - 46

Get sequence
Deep sequencing 8 reads, 1 experiments
Evidence experimental; array-cloned [1]
Predicted targets

Mature sequence hsa-miR-518c-3p

Accession MIMAT0002848
Previous IDs hsa-miR-518c
Sequence

62 -  

caaagcgcuucucuuuagagugu

 - 84

Get sequence
Deep sequencing 5 reads, 3 experiments
Evidence experimental; array-cloned [1], cloned [2]
Predicted targets

References

1
PMID:15965474 "Identification of hundreds of conserved and nonconserved human microRNAs" Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z Nat Genet. 37:766-770(2005).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).