Stem-loop sequence hsa-mir-518b

Accession MI0003156
Symbol HGNC:MIR518B
Description Homo sapiens miR-518b stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
   u      gc    c      a       uc    g  u 
uca gcugug  ccuc agaggg agcgcuu  uguu uc g
||| ||||||  |||| |||||| |||||||  |||| || a
agu uggcau  ggag uuuccc ucgcgaa  acaa ag a
   u      uu    a      c       --    a  a
Get sequence
Deep sequencing
64 reads, 5 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr19: 54205991-54206073 [+]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-518b
hsa-mir-526b chr19: 54197647-54197729 [+]
hsa-mir-519b chr19: 54198467-54198547 [+]
hsa-mir-525 chr19: 54200787-54200871 [+]
hsa-mir-523 chr19: 54201639-54201725 [+]
hsa-mir-518f chr19: 54203269-54203355 [+]
hsa-mir-520b chr19: 54204481-54204541 [+]
hsa-mir-518b chr19: 54205991-54206073 [+]
hsa-mir-526a-1 chr19: 54209506-54209590 [+]
hsa-mir-520c chr19: 54210707-54210793 [+]
hsa-mir-518c chr19: 54211989-54212089 [+]
hsa-mir-524 chr19: 54214256-54214342 [+]
hsa-mir-517a chr19: 54215522-54215608 [+]
Database links

Mature sequence hsa-miR-518b

Accession MIMAT0002844
Sequence

51 -  

caaagcgcuccccuuuagaggu

 - 72

Get sequence
Deep sequencing 62 reads, 5 experiments
Evidence experimental; array-cloned [1], cloned [2]
Predicted targets

References

1
PMID:15965474 "Identification of hundreds of conserved and nonconserved human microRNAs" Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z Nat Genet. 37:766-770(2005).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).