Stem-loop sequence ptr-mir-106b

AccessionMI0003070 (change log)
DescriptionPan troglodytes miR-106b stem-loop
Gene family MIPF0000001; mir-17
        c     -ua       g       a a    --  uc 
5' ccugc ggggc   aagugcu acagugc g uagu  gg  c
   ||||| |||||   ||||||| ||||||| | ||||  ||   
3' ggacg ccucg   uucaugg ugucacg c aucg  cc  u
        a     ucg       g       c -    ug  uc 
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Confidence Annotation confidence: not enough data
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Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Coordinates (Pan_tro3.0; GCA_000001515.5) Overlapping transcripts
chr7: 103151247-103151328 [-]
ENSPTRT00000036049 ; MCM7-201; intron 13
Clustered miRNAs
< 10kb from ptr-mir-106b
ptr-mir-106bchr7: 103151247-103151328 [-]
ptr-mir-93chr7: 103151022-103151101 [-]
ptr-mir-25chr7: 103150814-103150897 [-]
Database links

Mature sequence ptr-miR-106b

Accession MIMAT0002769

12 - 


 - 32

Get sequence
Evidence by similarity; MI0000734
Predicted targets


PMID:15652478 "Phylogenetic shadowing and computational identification of human microRNA genes" Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E Cell. 120:21-24(2005).