Stem-loop sequence ppa-mir-93

AccessionMI0003065 (change log)
DescriptionPan paniscus miR-93 stem-loop
Gene family MIPF0000001; mir-17
Stem-loop
             -ca       -     u    g   ug  au 
5' cugggggcuc   aagugcu guucg gcag uag  ug  u
   ||||||||||   ||||||| ||||| |||| |||  ||   
3' ggcccccgag   uucacga cgagu cguc auc  gc  a
             ccc       u     -    -   ca  cc 
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Coordinates (panpan1.1; GCA_000258655.2) Overlapping transcripts
chr7: 105562577-105562656 [-]
intergenic
Clustered miRNAs
< 10kb from ppa-mir-93
ppa-mir-106bchr7: 105562802-105562883 [-]
ppa-mir-93chr7: 105562577-105562656 [-]
ppa-mir-25chr7: 105562369-105562452 [-]
Database links

Mature sequence ppa-miR-93

Accession MIMAT0002764
Sequence

12 - 

aaagugcuguucgugcagguag

 - 33

Get sequence
Evidence by similarity; MI0000095

References

1
PMID:15652478 "Phylogenetic shadowing and computational identification of human microRNA genes" Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E Cell. 120:21-24(2005).