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miRBase |
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Stem-loop sequence ppy-mir-194 |
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| Accession | MI0003028 | |||||
| Description | Pongo pygmaeus miR-194 stem-loop | |||||
| Gene family | MIPF0000055; mir-194 | |||||
| Community annotation |
This text is a summary paragraph taken from the Wikipedia entry entitled mir-194_microRNA_precursor_family. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ... In molecular biology, miR-194 microRNA precursor is a small non-coding RNA gene that regulated gene expression. Its expression has been verified in mouse (MI0000236, MI0000733) and in human (MI0000488, MI0000732). mir-194 appears to be a vertebrate-specific miRNA and has now been predicted or experimentally confirmed in a range of vertebrate species (MIPF0000055). The mature microRNA is processed from the longer hairpin precursor by the Dicer enzyme. In this case, the mature sequence is excised from the 5' arm of the hairpin. |
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| Stem-loop |
a - uu u a g cu gu uggu g aucaag guaacagca cuccau ugga gu a |||| | |||||| ||||||||| |||||| |||| || acca u uaguuu cauuguugu gaggug accu ua c a u gg u a - -u ac |
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| Comments |
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated. |
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| Genome context |
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| Clustered miRNAs |
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Mature sequence ppy-miR-194 |
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| Accession | MIMAT0002731 |
| Sequence |
15 - uguaacagcaacuccaugugga - 36 |
| Evidence | by similarity; MI0000488 |
| Predicted targets |
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References |
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| 1 |
PMID:15652478
"Phylogenetic shadowing and computational identification of human microRNA genes"
Cell. 120:21-24(2005).
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