Stem-loop sequence ptr-mir-216a

Accession MI0002862
Previous IDs ptr-mir-216
Description Pan troglodytes miR-216a stem-loop
Gene family MIPF0000054; mir-216
Stem-loop 
----  u     u   uug    -----------       cu   a        ---a   u 
    ga ggcug gag   gcuu           aucucag  ggc acugugag    ugu c
    || ||||| |||   ||||           |||||||  ||| ||||||||    |||  
    cu ccgau cuu   cgag           uaggguc  cug ugacacuc    aca a
agca  c     c   uaa    acaaaucaaau       -u   g        ccua   u
Get sequence
Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Coordinates (PanTro2.1.4) Overlapping transcripts
2A: 56852519-56852627 [-]
intergenic
Clustered miRNAs
< 10kb from ptr-mir-216a
ptr-mir-216a 2A: 56852519-56852627 [-]
ptr-mir-217 2A: 56846526-56846634 [-]
Database links

Mature sequence ptr-miR-216a

Accession MIMAT0002559
Previous IDs ptr-miR-216
Sequence

18 -  

uuaucucagcuggcaacugug

 - 38

Get sequence
Evidence by similarity; MI0000292

References

1
PMID:15652478 "Phylogenetic shadowing and computational identification of human microRNA genes" Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E Cell. 120:21-24(2005).