Stem-loop sequence ppy-mir-196-2

AccessionMI0002826 (change log)
DescriptionPongo pygmaeus miR-196-2 stem-loop
Gene family MIPF0000031; mir-196
Stem-loop
   -ug    - -uc       --c                  a          a ug   
5'    cucg c   agcugau   uguggcuuagguaguuuc uguuguuggg u  ag 
      |||| |   |||||||   |||||||||||||||||| |||||||||| |  | u
3'    gagc g   uuggcug   acauugaguccgucaaag acaacggcuc a  uu 
   cgg    u cuu       acu                  a          a gu   
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Confidence Annotation confidence: not enough data
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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Coordinates (P_pygmaeus_2.0.2; GCF_000001545.4) Overlapping transcripts
chr12: 53766642-53766751 [+]
intergenic
Database links

Mature sequence ppy-miR-196-2

Accession MIMAT0002523
Sequence

25 - 

uagguaguuucauguuguuggg

 - 46

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Evidence by similarity; MI0000279

References

1
PMID:15652478 "Phylogenetic shadowing and computational identification of human microRNA genes" Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E Cell. 120:21-24(2005).