Stem-loop sequence ptr-mir-33a

AccessionMI0002685 (change log)
Previous IDsptr-mir-33
DescriptionPan troglodytes miR-33a stem-loop
Gene family MIPF0000070; mir-33
Stem-loop
                 a uu          uucu  u 
5' cuguggugcauugu g  gcauugcaug    gg g
   |||||||||||||| |  ||||||||||    || g
3' gacacuacgugaca c  uguaacguac    cc u
                 c uu          ----  a 
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Confidence Annotation confidence: not enough data
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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Coordinates (Pan_tro3.0; GCA_000001515.5) Overlapping transcripts
chr22: 28560707-28560775 [+]
sense
ENSPTRT00000026976 ; SREBF2-201; intron 17
Database links

Mature sequence ptr-miR-33a

Accession MIMAT0002393
Previous IDsptr-miR-33
Sequence

6 - 

gugcauuguaguugcauug

 - 24

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Evidence by similarity; MI0000091
Predicted targets

References

1
PMID:15652478 "Phylogenetic shadowing and computational identification of human microRNA genes" Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E Cell. 120:21-24(2005).