Stem-loop sequence mml-mir-33a

Accession MI0002684
Previous IDs mml-mir-33
Description Macaca mulatta miR-33a stem-loop
Gene family MIPF0000070; mir-33
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled miR-33. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

miR-33 is a family of microRNA precursors, which are processed by the Dicer enzyme to give mature microRNAs. miR-33 is found in several animal species, including humans. In some species there is a single member of this family which gives the mature product mir-33. In humans there are two members of this family called mir-33a and mir-33b, which are located in intronic regions within two protein-coding genes for Sterol regulatory element-binding proteins (SREBP-2 and SREBP-1) respectively.

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Stem-loop
   cg         a uu          uucu  u 
cug  gugcauugu g  gcauugcaug    gg g
|||  ||||||||| |  ||||||||||    || g
gac  uacgugaca c  uguaacguac    cc u
   au         c uu          ----  a 
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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [2]. The expression of this mature miRNA was validated by Miska et al [1].

Database links

Mature sequence mml-miR-33a

Accession MIMAT0002392
Previous IDs mml-miR-33
Sequence

6 - 

gugcauuguaguugcauug

 - 24

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Evidence experimental; cloned [1]
Predicted targets

References

1
PMID:15345052 "Microarray analysis of microRNA expression in the developing mammalian brain" Miska EA, Alvarez-Saavedra E, Townsend M, Yoshii A, Sestan N, Rakic P, Constantine-Paton M, Horvitz HR Genome Biol. 5:R68(2004).
2
PMID:15652478 "Phylogenetic shadowing and computational identification of human microRNA genes" Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E Cell. 120:21-24(2005).