Stem-loop sequence ptr-mir-29a

AccessionMI0002661 (change log)
DescriptionPan troglodytes miR-29a stem-loop
Gene family MIPF0000009; mir-29
Stem-loop
               uuu       c    ucaa 
5' augacugauuuc   ugguguu agag    u
   ||||||||||||   ||||||| ||||    a
3' uauuggcuaaag   accacga ucuu    u
               ucu       -    uuaa 
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Confidence Annotation confidence: not enough data
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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Coordinates (Pan_tro3.0; GCA_000001515.5) Overlapping transcripts
chr7: 135424388-135424451 [-]
sense
ENSPTRT00000073192 ; ptr-mir-29a-201; exon 1
Clustered miRNAs
< 10kb from ptr-mir-29a
ptr-mir-29b-1chr7: 135425101-135425181 [-]
ptr-mir-29achr7: 135424388-135424451 [-]
Database links

Mature sequence ptr-miR-29a

Accession MIMAT0002364
Sequence

41 - 

cuagcaccaucugaaaucgguu

 - 62

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Evidence by similarity; MI0000087
Predicted targets

References

1
PMID:15652478 "Phylogenetic shadowing and computational identification of human microRNA genes" Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E Cell. 120:21-24(2005).