Stem-loop sequence ppa-mir-135-2

AccessionMI0002546 (change log)
DescriptionPan paniscus miR-135-2 stem-loop
Gene family MIPF0000028; mir-135
Stem-loop
   a   aaa     ucua   c            u            u g a 
5'  gau   uucac    gug uuuauggcuuuu auuccuauguga a u a
    |||   |||||    ||| |||||||||||| |||||||||||| | | u
3'  cua   aagug    cau aaguaccgaagg uagggauguacu u a a
   a   -aa     -uua   a            -            c g a 
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Confidence Annotation confidence: not enough data
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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Coordinates (panpan1.1; GCA_000258655.2) Overlapping transcripts
chr12: 98569370-98569469 [+]
intergenic
Database links

Mature sequence ppa-miR-135

Accession MIMAT0002250
Sequence

23 - 

uauggcuuuuuauuccuauguga

 - 45

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Evidence by similarity; MI0000453

References

1
PMID:15652478 "Phylogenetic shadowing and computational identification of human microRNA genes" Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E Cell. 120:21-24(2005).