Stem-loop sequence ptr-mir-135a-2

AccessionMI0002541 (change log)
Previous IDsptr-mir-135
DescriptionPan troglodytes miR-135a-2 stem-loop
Gene family MIPF0000028; mir-135
Stem-loop
   a   aaa     ucua   c            u            u g a 
5'  gau   uucac    gug uuuauggcuuuu auuccuauguga a u a
    |||   |||||    ||| |||||||||||| |||||||||||| | | u
3'  cua   aagug    cau aaguaccgaagg uagggauguacu u a a
   a   -aa     -uua   a            -            c g a 
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Confidence Annotation confidence: not enough data
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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Coordinates (Pan_tro3.0; GCA_000001515.5) Overlapping transcripts
chr12: 100343835-100343934 [+]
intergenic
Database links

Mature sequence ptr-miR-135a

Accession MIMAT0002252
Previous IDsptr-miR-135
Sequence

23 - 

uauggcuuuuuauuccuauguga

 - 45

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Evidence by similarity; MI0000452
Predicted targets

References

1
PMID:15652478 "Phylogenetic shadowing and computational identification of human microRNA genes" Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E Cell. 120:21-24(2005).