Stem-loop sequence hsa-mir-487a

Accession MI0002471
Previous IDs hsa-mir-487
Symbol HGNC:MIR487A
Description Homo sapiens miR-487a stem-loop
Gene family MIPF0000018; mir-154
Stem-loop 
      u     g   uua      c    -    c   a 
gguacu gaaga ugg   ucccug ugug uucg uua u
|||||| ||||| |||   |||||| |||| |||| ||| u
cuauga uuuuu acc   agggac auac aagc agu u
      c     g   uac      -    u    -   a
Get sequence
Deep sequencing
23 reads, 4 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr14: 101518783-101518862 [+]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-487a
hsa-mir-1185-1 chr14: 101509314-101509399 [+]
hsa-mir-1185-2 chr14: 101510535-101510620 [+]
hsa-mir-381 chr14: 101512257-101512331 [+]
hsa-mir-487b chr14: 101512792-101512875 [+]
hsa-mir-539 chr14: 101513658-101513735 [+]
hsa-mir-889 chr14: 101514238-101514316 [+]
hsa-mir-544a chr14: 101514995-101515085 [+]
hsa-mir-655 chr14: 101515887-101515983 [+]
hsa-mir-487a chr14: 101518783-101518862 [+]
hsa-mir-382 chr14: 101520643-101520718 [+]
hsa-mir-134 chr14: 101521024-101521096 [+]
hsa-mir-668 chr14: 101521595-101521660 [+]
hsa-mir-485 chr14: 101521756-101521828 [+]
hsa-mir-323b chr14: 101522556-101522637 [+]
hsa-mir-154 chr14: 101526092-101526175 [+]
hsa-mir-496 chr14: 101526910-101527011 [+]
hsa-mir-377 chr14: 101528387-101528455 [+]
Database links

Mature sequence hsa-miR-487a

Accession MIMAT0002178
Previous IDs hsa-miR-487
Sequence

49 -  

aaucauacagggacauccaguu

 - 70

Get sequence
Deep sequencing 21 reads, 2 experiments
Evidence experimental; cloned [1-3], Northern [1]
Predicted targets

References

1
PMID:15978578 "Identification of human fetal liver miRNAs by a novel method" Fu H, Tie Y, Xu C, Zhang Z, Zhu J, Shi Y, Jiang H, Sun Z, Zheng X FEBS Lett. 579:3849-3854(2005).
2
PMID:16274478 "Identification of clustered microRNAs using an ab initio prediction method" Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M BMC Bioinformatics. 6:267(2005).
3
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).