Stem-loop sequence mmu-mir-463

Accession

MI0002398

Symbol

MGI:Mir463

Description

Mus musculus miR-463 stem-loop

Gene family

MIPF0000425; mir-463

Stem-loop

-----------        a  u  u    ---      guaa 
           cuuuaccu au ug uguc   caucau    a
           |||||||| || || ||||   ||||||    a
           gagaugga ua ac acag   guagua    c
ucacuuggaag        a  u  c    aua      aaua 

Deep sequencing

reads, experiments

Genome context

• Coordinates (GRCm38): chrX: 66799223-66799297 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from mmu-mir-463

• mmu-mir-881: chrX: 66801944-66802021 [-]
• mmu-mir-878: chrX: 66801508-66801585 [-]
• mmu-mir-880: chrX: 66800530-66800607 [-]
• mmu-mir-463: chrX: 66799223-66799297 [-]
• mmu-mir-741: chrX: 66796805-66796875 [-]
• mmu-mir-471: chrX: 66792595-66792661 [-]
• mmu-mir-883b: chrX: 66789890-66789967 [-]

Database links

• ENTREZGENE: 723887;Mir463
• MGI: 3619451;Mir463

Mature sequence mmu-miR-463-5p

• Accession: MIMAT0002104
• Previous IDs: mmu-miR-463;mmu-miR-463*
• Sequence: 4 - uaccuaauuuguuguccaucau - 25
• Evidence: experimental; cloned [1-2], Solexa [3-4]
• Predicted targets:
  • DIANA-MICROT:mmu-miR-463-5p
  • MICRORNA.ORG:mmu-miR-463-5p
  • MIRDB:mmu-miR-463-5p
  • RNA22-MMU:mmu-miR-463-5p

Mature sequence mmu-miR-463-3p

• Accession: MIMAT0004758
• Previous IDs: mmu-miR-463
• Sequence: 41 - ugauagacaccauauaagguag - 62
• Evidence: experimental; cloned [2], Solexa [3-4]
• Predicted targets:
  • DIANA-MICROT:mmu-miR-463-3p
  • MICRORNA.ORG:mmu-miR-463-3p
  • MIRDB:mmu-miR-463-3p
  • RNA22-MMU:mmu-miR-463-3p
  • TARGETSCAN-VERT:mmu-miR-463

References

1. PMID:15901636 "MicroRNA Mirn122a reduces expression of the posttranscriptionally regulated germ cell transition protein 2 (Tnp2) messenger RNA (mRNA) by mRNA cleavage" Yu Z, Raabe T, Hecht NB Biol Reprod. 73:427-433(2005).
2. PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
3. PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
4. PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).