Stem-loop sequence ptc-MIR478q

AccessionMI0002385 (change log)
DescriptionPopulus trichocarpa miR478q stem-loop
Gene family MIPF0000052; MIR478
Literature search

1 open access papers mention ptc-MIR478q
(1 sentences)

Stem-loop
   uc     ---uu    -   aa       uguuuua   --g    u    a 
5'   uccuu     uagg gau  acguuaa       gac   aguc ccua a
     |||||     |||| |||  |||||||       |||   |||| |||| u
3'   aggga     aucc cug  ugcaauu       cug   ucag ggau u
   cc     uuuuu    u   --       ---uuua   uaa    -    u 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000344.2: 11781607-11781701 [+]
intergenic
Database links

Mature sequence ptc-miR478q

Accession MIMAT0002091
Sequence

70 - 

uaacgugucuccuauuuuuaggga

 - 93

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Evidence by similarity; MI0002370

References

1
PMID:15994906 "Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis" Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL Plant Cell. 17:2186-2203(2005).