Stem-loop sequence ptc-MIR169s

Accession MI0002269
Description Populus trichocarpa miR169s stem-loop
Gene family MIPF0000037; MIR169_2
Stem-loop 
ag    ug  uc          ga         agca  u     ca   cucc        a 
  agug  au  agccaaggau  cuugccggc    gg aagag  aag    guuuuugg a
  ||||  ||  ||||||||||  |||||||||    || |||||  |||    ||||||||  
  ucau  ua  ucgguuccug  gaacggccg    cc uuuuc  uuc    uaggaacu g
--    gu  ca          uc         ---g  -     aa   --ua        u
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Genome context
Coordinates (JGI_Poptr2.0) Overlapping transcripts
scaffold_18: 3350207-3350326 [-]
intergenic

Mature sequence ptc-miR169s

Accession MIMAT0001975
Sequence

11 -  

ucagccaaggaugacuugccg

 - 31

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Evidence by similarity; MI0000976

References

1
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).