Stem-loop sequence ptc-MIR169d

Accession MI0002254
Description Populus trichocarpa miR169d stem-loop
Gene family MIPF0000037; MIR169_2
Stem-loop 
gag       c         ug          auuuccuc        c     cg 
   ucgaaug agccaagga  acuugccggc        cuaaguag gagcc  g
   ||||||| |||||||||  ||||||||||        |||||||| |||||   
   gguuuau ucgguuccu  ugggcggccg        gguuuauc uucgg  c
--u       a         gu          gcccgcac        -     aa
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Genome context
Coordinates (JGI_Poptr2.0) Overlapping transcripts
scaffold_6: 5569290-5569400 [-]
intergenic

Mature sequence ptc-miR169d

Accession MIMAT0001960
Sequence

11 -  

cagccaaggaugacuugccgg

 - 31

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Evidence by similarity; MI0000212

References

1
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).