Stem-loop sequence dre-mir-430a-6

Accession MI0002115
Description Danio rerio miR-430a-6 stem-loop
Gene family MIPF0000003; mir-430
Stem-loop 
      -auc g      c     -      g   ug   gc 
gucacu    g uacccu acaaa ggcacu acu  gau  u
||||||    | |||||| ||||| |||||| |||  |||   
caguga    u augggg uguuu ucguga ugg  uua  g
      acuu g      u     a      a   --   au
Get sequence
Genome context
Coordinates (Zv9) Overlapping transcripts
4: 28008349-28008430 [+]
sense
ENSDART00000121701 ; dre-mir-430a-5.1-201; exon 1
ENSDART00000121701 ; dre-mir-430a-5.1-201; exon 1
Clustered miRNAs
< 10kb from dre-mir-430a-6
dre-mir-430a-18 4: 28000750-28000839 [+]
dre-mir-430c-1 4: 28000922-28000994 [+]
dre-mir-430b-4 4: 28001179-28001259 [+]
dre-mir-430a-4 4: 28001385-28001466 [+]
dre-mir-430c-2 4: 28001526-28001598 [+]
dre-mir-430b-5 4: 28001770-28001850 [+]
dre-mir-430a-2 4: 28002501-28002582 [+]
dre-mir-430c-3 4: 28002664-28002736 [+]
dre-mir-430b-10 4: 28002921-28003001 [+]
dre-mir-430a-12 4: 28003127-28003208 [+]
dre-mir-430c-4 4: 28003268-28003340 [+]
dre-mir-430b-1 4: 28003511-28003591 [+]
dre-mir-430a-3 4: 28004242-28004323 [+]
dre-mir-430c-5 4: 28004405-28004477 [+]
dre-mir-430b-6 4: 28004662-28004742 [+]
dre-mir-430a-13 4: 28004868-28004949 [+]
dre-mir-430c-6 4: 28005009-28005081 [+]
dre-mir-430b-11 4: 28005266-28005346 [+]
dre-mir-430a-16 4: 28005472-28005553 [+]
dre-mir-430b-9 4: 28005856-28005936 [+]
dre-mir-430a-5 4: 28006586-28006667 [+]
dre-mir-430c-7 4: 28006749-28006821 [+]
dre-mir-430b-12 4: 28007006-28007086 [+]
dre-mir-430i-1 4: 28007212-28007293 [+]
dre-mir-430c-8 4: 28007375-28007447 [+]
dre-mir-430b-2 4: 28007618-28007698 [+]
dre-mir-430a-6 4: 28008349-28008430 [+]
dre-mir-430c-9 4: 28008512-28008584 [+]
dre-mir-430b-7 4: 28008769-28008849 [+]
dre-mir-430a-11 4: 28008975-28009056 [+]
dre-mir-430c-10 4: 28009138-28009210 [+]
dre-mir-430b-13 4: 28009395-28009475 [+]
dre-mir-430i-2 4: 28009601-28009682 [+]
dre-mir-430c-11 4: 28009764-28009836 [+]
dre-mir-430b-18 4: 28010007-28010087 [+]
dre-mir-430a-7 4: 28010738-28010819 [+]
dre-mir-430c-12 4: 28010901-28010973 [+]
dre-mir-430b-14 4: 28011158-28011238 [+]
dre-mir-430a-17 4: 28011364-28011445 [+]
dre-mir-430b-20 4: 28011748-28011828 [+]
dre-mir-430a-8 4: 28012478-28012559 [+]
dre-mir-430c-13 4: 28012641-28012713 [+]
dre-mir-430b-15 4: 28012898-28012978 [+]
dre-mir-430i-3 4: 28013104-28013185 [+]
dre-mir-430c-14 4: 28013267-28013339 [+]
dre-mir-430b-19 4: 28013510-28013590 [+]
dre-mir-430a-9 4: 28014241-28014322 [+]
dre-mir-430c-15 4: 28014404-28014476 [+]
dre-mir-430b-16 4: 28014661-28014741 [+]
dre-mir-430a-14 4: 28014867-28014948 [+]
dre-mir-430c-16 4: 28015008-28015080 [+]
dre-mir-430b-3 4: 28015251-28015331 [+]
dre-mir-430a-10 4: 28015981-28016062 [+]
dre-mir-430c-17 4: 28016144-28016216 [+]
dre-mir-430b-8 4: 28016401-28016481 [+]
dre-mir-430a-15 4: 28016607-28016688 [+]
dre-mir-430c-18 4: 28016748-28016820 [+]
dre-mir-430b-17 4: 28017005-28017085 [+]
Database links

Mature sequence dre-miR-430a

Accession MIMAT0001423
Sequence

50 -  

uaagugcuauuuguugggguag

 - 71

Get sequence
Evidence experimental; cloned [1-2]
Validated targets

References

1
PMID:15774722 "MicroRNAs regulate brain morphogenesis in zebrafish" Giraldez AJ, Cinalli RM, Glasner ME, Enright AJ, Thomson JM, Baskerville S, Hammond SM, Bartel DP, Schier AF Science. 308:833-838(2005).
2
PMID:15937218 "The developmental miRNA profiles of zebrafish as determined by small RNA cloning" Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T Genes Dev. 19:1288-1293(2005).