Stem-loop sequence dre-mir-100-1

Accession MI0001958
Description Danio rerio miR-100-1 stem-loop
Gene family MIPF0000025; mir-99
Stem-loop 
    agaccu   -   u    c a   cg     c   a      g  ac 
gaag      gcc ugc gaca a acc  uagau cga cuugug ug  u
||||      ||| ||| |||| | |||  ||||| ||| |||||| ||   
cuuc      cgg gug cugu u ugg  aucua guu gaacac ac  g
    ------   u   u    c a   au     u   c      -  cu
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Genome context
Coordinates (Zv9) Overlapping transcripts
15: 20399275-20399370 [+]
intergenic
Clustered miRNAs
< 10kb from dre-mir-100-1
dre-mir-100-1 15: 20399275-20399370 [+]
dre-let-7a-2 15: 20399518-20399601 [+]
Database links

Mature sequence dre-miR-100

Accession MIMAT0001813
Sequence

24 -  

aacccguagauccgaacuugug

 - 45

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Evidence experimental; cloned [1]

References

1
PMID:15937218 "The developmental miRNA profiles of zebrafish as determined by small RNA cloning" Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T Genes Dev. 19:1288-1293(2005).