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miRBase |
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Stem-loop sequence zma-MIR171f |
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Accession | MI0001793 (change log) | ||||
Description | Zea mays miR171f stem-loop | ||||
Gene family | MIPF0000030; MIR171_1 | ||||
Literature search |
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21 open access papers mention zma-MIR171f | ||||
Stem-loop |
uugguuguu - -ag c ------- - g cgcggguggcuuauagcuua 5' ggcu gagag ug gauguuggcauggcucaauca acu cgcc gc a |||| ||||| || ||||||||||||||||||||| ||| |||| || 3' ccga cucuu ac cuauaaccgugccgaguuagu uga gcgg cg u -----auau u cca a uaauuug c g uggagcuagcuuacgcgucu |
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Deep sequencing |
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Confidence |
Annotation confidence: low
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Genome context |
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Database links |
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Mature sequence zma-miR171f-5p |
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Accession | MIMAT0015161 |
Previous IDs | zma-miR171f* |
Sequence |
23 - cgauguuggcauggcucaauc - 43 |
Deep sequencing | 28 reads, 13 experiments |
Evidence | experimental; Illumina [3] |
Mature sequence zma-miR171f-3p |
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Accession | MIMAT0001695 |
Previous IDs | zma-miR171f |
Sequence |
118 - uugagccgugccaauaucaca - 138 |
Deep sequencing | 2179 reads, 175 experiments |
Evidence | experimental; Illumina [3] |
References |
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1 |
PMID:15916721
"Identification and characterization of new plant microRNAs using EST analysis"
Cell Res. 15:336-360(2005).
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2 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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3 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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