Stem-loop sequence hsa-mir-431

Accession MI0001721
Symbol HGNC:MIR431
Description Homo sapiens miR-431 stem-loop
Gene family MIPF0000142; mir-431
Stem-loop 
---------------ucc  c     c       u          c  u a     ----   aca 
                  ug uuguc ugcgagg gucuugcagg cg c ugcag    gcc   c
                  || ||||| ||||||| |||||||||| || | |||||    |||    
                  ac agcag acgcucu cgggacguuc gc g acguu    ugg   u
gcagcaaccacuacuccu  -     a       u          u  u g     gcaa   cag
Get sequence
Deep sequencing
24 reads, 3 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr14: 101347344-101347457 [+]
antisense
OTTHUMT00000395127 ; RTL1-001; exon 1
OTTHUMT00000395127 ; RTL1-001; exon 1
OTTHUMT00000395127 ; RTL1-001; exon 1
ENST00000534062 ; RTL1-001; exon 1
ENST00000534062 ; RTL1-001; exon 1
ENST00000534062 ; RTL1-001; exon 1
Clustered miRNAs
< 10kb from hsa-mir-431
hsa-mir-337 chr14: 101340830-101340922 [+]
hsa-mir-665 chr14: 101341370-101341441 [+]
hsa-mir-431 chr14: 101347344-101347457 [+]
hsa-mir-433 chr14: 101348223-101348315 [+]
hsa-mir-127 chr14: 101349316-101349412 [+]
hsa-mir-432 chr14: 101350820-101350913 [+]
hsa-mir-136 chr14: 101351039-101351120 [+]
Database links

Mature sequence hsa-miR-431-5p

Accession MIMAT0001625
Previous IDs hsa-miR-431
Sequence

20 -  

ugucuugcaggccgucaugca

 - 40

Get sequence
Deep sequencing 15 reads, 3 experiments
Evidence experimental; cloned [1-2]
Predicted targets

Mature sequence hsa-miR-431-3p

Accession MIMAT0004757
Previous IDs hsa-miR-431*
Sequence

63 -  

caggucgucuugcagggcuucu

 - 84

Get sequence
Deep sequencing 9 reads, 1 experiments
Evidence experimental; cloned [2]
Predicted targets

References

1
PMID:15891114 "Clustering and conservation patterns of human microRNAs" Altuvia Y, Landgraf P, Lithwick G, Elefant N, Pfeffer S, Aravin A, Brownstein MJ, Tuschl T, Margalit H Nucleic Acids Res. 33:2697-2706(2005).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).