Stem-loop sequence ame-bantam

Accession MI0001574
Description Apis mellifera bantam stem-loop
Gene family MIPF0000153; bantam
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled bantam_microRNA. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

In molecular biology bantam microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

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Stem-loop
    -----a       cu                 ga    uaga 
ucga      aacgaaa  gguuuucacaaugauuu  caga    u
||||      |||||||  |||||||||||||||||  ||||     
agcu      uuguuuu  ucgaaaguguuacuaga  gucu    u
    gaaaag       ag                 --    uagc 
Get sequence
Deep sequencing
26698 reads, 1 experiments
Genome context
Coordinates (Amel_4.0) Overlapping transcripts
Group14.24: 1302336-1302422 [+]
intergenic
Database links

Mature sequence ame-bantam

Accession MIMAT0001470
Sequence

50 - 

ugagaucauugugaaagcugauu

 - 72

Get sequence
Deep sequencing 25819 reads, 1 experiments
Evidence experimental; RTPCR [1]

References

1
PMID:17543122 "Computational and transcriptional evidence for microRNAs in the honey bee genome" Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG Genome Biol. 8:R97(2007).