Stem-loop sequence oar-mir-431

AccessionMI0001520 (change log)
DescriptionOvis aries miR-431 stem-loop
Gene family MIPF0000142; mir-431
Literature search

5 open access papers mention oar-mir-431
(15 sentences)

Stem-loop
   -----------------c          gu u     aggccgucaugcaggc 
5'                   guccugcgag  g cuugc                c
                     ||||||||||  | |||||                 
3'                   cgggacguuc  c ggacg                a
   acacagcagaacgcucug          ug u     uugcaaaggcagucac 
Get sequence
Deep sequencing
97 reads, 0 reads per million, 12 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Oar_v4.0; GCA_000298735.2) Overlapping transcripts
chr18: 64383338-64383428 [+]
antisense
ENSOART00000015109 ; oar-mir-136-201; exon 1
Clustered miRNAs
< 10kb from oar-mir-431
oar-mir-665chr18: 64379046-64379140 [+]
oar-mir-431chr18: 64383338-64383428 [+]
oar-mir-433chr18: 64384195-64384308 [+]
oar-mir-127chr18: 64385295-64385408 [+]
oar-mir-432chr18: 64386792-64386881 [+]
oar-mir-136chr18: 64386976-64387067 [+]
Database links

Mature sequence oar-miR-431

Accession MIMAT0001414
Sequence

13 - 

ugucuugcaggccgucaugcagg

 - 35

Get sequence
Deep sequencing87 reads, 12 experiments
Evidence experimental; PCR [1]

References

1
PMID:15854907 "RNAi-mediated allelic trans-interaction at the imprinted Rtl1/Peg11 locus" Davis E, Caiment F, Tordoir X, Cavaille J, Ferguson-Smith A, Cockett N, Georges M, Charlier C Curr Biol. 15:743-749(2005).