Stem-loop sequence gga-mir-205a

Accession MI0001267
Description Gallus gallus miR-205a stem-loop
Gene family MIPF0000058; mir-205
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled Mir-205. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

In molecular biology miR-205 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms. They are involved in numerous cellular processes, including development, proliferation, and apoptosis. Currently, it is believed that miRNAs elicit their effect by silencing the expression of target genes. The miR-200 family (miR-200a, miR-200b, miR-200c, miR-141 and miR-429) and miR-205 are frequently silenced in advanced cancer. Studies has shown that by targeting the transcriptional repressors of E-cadherin, ZEB1 and ZEB2, it is involved in epithelial to mesenchymal transition (EMT) and tumor invasion. Recently, miR-200 silencing was also reported in cancer stem cells, implying that miR-200 deregulation is a key event in multiple levels of tumor biology. However, what prevents miR-200 expression remains largely unanswered.

Show Wikipedia entry View @ Wikipedia Edit Wikipedia entry
Stem-loop
ga  -a      ggu   g    c           c        ucucg 
  ca  uccaug   ucu uugu cuucauuccac ggagucug     u
  ||  ||||||   ||| |||| ||||||||||| ||||||||     a
  gu  agguac   aga aaca gaagugaggug cuuuagac     c
-a  ag      ---   g    c           a        caauc 
Get sequence
Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context
Coordinates (Gallus-gallus-4.0) Overlapping transcripts
chr26: 3017914-3018009 [+]
intergenic
Database links

Mature sequence gga-miR-205a

Accession MIMAT0001184
Sequence

22 - 

uccuucauuccaccggagucug

 - 43

Get sequence
Evidence by similarity; MI0000285
Predicted targets

References

1
PMID:15592404 "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution" International Chicken Genome Sequencing Consortium Nature. 432:695-716(2004).