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Stem-loop sequence MI0001259

Accession MI0001259
ID gga-let-7a-2
Description Gallus gallus let-7a-2 stem-loop
Stem-loop 
   uu   g   u             uagaa ua a 
agg  gag uag agguuguauaguu     u  c c
|||  ||| ||| |||||||||||||     |  | c
ucc  uuc auc uccaacaugucaa     a  g a
   -u   g   c             --uag gg a
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Genome context
Coordinates (WASHUC2) Overlapping transcripts
24: 3380993-3381064 [+]
intergenic
Clustered miRNAs
< 10kb from gga-let-7a-2
gga-mir-100 24: 3372894-3372973 [+]
gga-let-7a-2 24: 3380993-3381064 [+]
Database links
Gene family

MIPF0000002; let-7

Mature sequence MIMAT0001101

Accession MIMAT0001101
ID gga-let-7a
Sequence

5 -  

ugagguaguagguuguauaguu

 - 26

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Evidence experimental; cloned [2-3]
Predicted targets

References

1
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution" International Chicken Genome Sequencing Consortium Nature. 432:695-716(2004).
2
McBride D, Carre W, Law A, Clinton M Unpublished.
3
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs" Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Watson M, Nair V J Virol. 82:4007-4015(2008).