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Stem-loop sequence MI0001247

Accession MI0001247
ID gga-mir-1a-1
Description Gallus gallus miR-1a-1 stem-loop
Stem-loop 
u    g                gc     u  acc 
 gaga acauacuucuuuauau  ccaua ga   u
 |||| ||||||||||||||||  ||||| ||   g
 cuuu uguaugaagaaaugua  gguau cu   g
a    a                -a     -  aac
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Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context
Coordinates (WASHUC2) Overlapping transcripts
20: 8107831-8107901 [+]
intergenic
Clustered miRNAs
< 10kb from gga-mir-1a-1
gga-mir-1a-1 20: 8107831-8107901 [+]
gga-mir-1773 20: 8109136-8109213 [+]
Database links
Gene family

MIPF0000038; mir-1

Mature sequence MIMAT0001127

Accession MIMAT0001127
ID gga-miR-1a
Sequence

46 -  

uggaauguaaagaaguaugua

 - 66

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Evidence by similarity; MI0000139
Predicted targets

References

1
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution" International Chicken Genome Sequencing Consortium Nature. 432:695-716(2004).