Stem-loop sequence gga-mir-218-1

AccessionMI0001212 (change log)
DescriptionGallus gallus miR-218-1 stem-loop
Gene family MIPF0000026; mir-218
Literature search

4 open access papers mention gga-mir-218-1
(38 sentences)

Stem-loop
   ---u  uaau  a   a   u      u         cu        gguugugag 
5'     ga    gu gcg gau uucugu gugcuugau  aaccaugu         g
       ||    || ||| ||| |||||| |||||||||  ||||||||          
3'     cu    cg cgc cug aaggua cacgaacug  uugguaca         u
   acau  --uu  a   a   c      c         uc        aaaugagua 
Get sequence
Deep sequencing
27546 reads, 180 reads per million, 5 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Gallus_gallus-5.0; GCA_000002315.3) Overlapping transcripts
chr4: 75581203-75581311 [-]
sense
ENSGALT00000037322 ; SLIT2-201; intron 14
Database links

Mature sequence gga-miR-218-5p

Accession MIMAT0001144
Sequence

24 - 

uugugcuugaucuaaccaugu

 - 44

Get sequence
Deep sequencing54394 reads, 5 experiments
Evidence experimental; Illumina [2]
Database links
Predicted targets

Mature sequence gga-miR-218-3p

Accession MIMAT0026518
Sequence

66 - 

caugguucugucaagcaccaug

 - 87

Get sequence
Deep sequencing681 reads, 5 experiments
Evidence experimental; Illumina [2]
Predicted targets

References

1
PMID:15592404 "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution" International Chicken Genome Sequencing Consortium Nature. 432:695-716(2004).
2
" McBride D, Carre W, Law A, Clinton M Unpublished.
3
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).