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Stem-loop sequence MI0001196

Accession MI0001196
ID gga-mir-1a-2
Description Gallus gallus miR-1a-2 stem-loop
Stem-loop 
a      c    c                ac     ugaaca 
 ccugcu agag acauacuucuuuaugu  ccaua      u
 |||||| |||| ||||||||||||||||  |||||       
 ggacgg uuuu uguaugaagaaaugua  gguau      a
c      u    a                -a     cguaac
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Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context
Coordinates (WASHUC2) Overlapping transcripts
2: 105673483-105673567 [-]
antisense
ENSGALT00000024152 ; IPI00585018.2; intron 12
Clustered miRNAs
< 10kb from gga-mir-1a-2
gga-mir-1a-2 2: 105673483-105673567 [-]
gga-mir-133a-1 2: 105670357-105670443 [-]
Database links
Gene family

MIPF0000038; mir-1

Mature sequence MIMAT0001127

Accession MIMAT0001127
ID gga-miR-1a
Sequence

53 -  

uggaauguaaagaaguaugua

 - 73

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Evidence by similarity; MI0000437
Predicted targets

References

1
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution" International Chicken Genome Sequencing Consortium Nature. 432:695-716(2004).