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Stem-loop sequence MI0001186

Accession MI0001186
ID gga-mir-15a
Description Gallus gallus miR-15a stem-loop
Stem-loop
     gcauaac ua        ua         gggu   g 
ccuug       g  gcagcaca  augguuugu    uuu a
|||||       |  ||||||||  |||||||||    |||  
ggaac       c  cgucgugu  uaccggacg    gga a
     auaaaaa uc        ua         ---u   a 
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Genome context
Coordinates (WASHUC2) Overlapping transcripts
1: 173700493-173700575 [-]
intergenic
Clustered miRNAs
< 10kb from gga-mir-15a
gga-mir-15a 1: 173700493-173700575 [-]
gga-mir-16-1 1: 173700351-173700434 [-]
Database links
Gene family

MIPF0000006; mir-15

Mature sequence MIMAT0001117

Accession MIMAT0001117
ID gga-miR-15a
Sequence

14 - 

uagcagcacauaaugguuugu

 - 34

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Evidence experimental; cloned [2-4], Northern [2]
Predicted targets

References

1
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution" International Chicken Genome Sequencing Consortium Nature. 432:695-716(2004).
2
"Identification of microRNAs from different tissues of chicken embryo and adult chicken" Xu H, Wang X, Du Z, Li N FEBS Lett. 580:3610-3616(2006).
3
McBride D, Carre W, Law A, Clinton M Unpublished.
4
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs" Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Watson M, Nair V J Virol. 82:4007-4015(2008).