Stem-loop sequence osa-MIR319b

Accession MI0001099
Description Oryza sativa miR319b stem-loop
Gene family MIPF0000010; MIR159
Stem-loop 
--  u   u   a a    gu           cu  u         ua      -   --  g  g   ac        c  ca   c    aagaaa    ug 
  ga gga gga g gagc  ccuucagucca  ca gggcggugc  gggucg aau  ua cu ccg  ucauucac ca  ugc aagc      cgcu  a
  || ||| ||| | ||||  |||||||||||  || |||||||||  |||||| |||  || || |||  |||||||| ||  ||| ||||      ||||   
  cu ccu ccu c cucg  ggaagucaggu  gu ucugccgcg  ucuagc uug  au ga ggc  aguaagug gu  acg uucg      gcga  g
ag  -   -   c -    ug           uc  u         -c      c   ca  g  g   ga        a  ag   a    ----aa    ua
Get sequence
Deep sequencing
1394 reads, 4 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr1: 6677570-6677766 [-]
intergenic

Mature sequence osa-miR319b

Accession MIMAT0001029
Sequence

168 -  

uuggacugaagggugcuccc

 - 187

Get sequence
Deep sequencing 687 reads, 4 experiments
Evidence by similarity; MI0000544

References

1
PMID:15200956 "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" Jones-Rhoades MW, Bartel DP Mol Cell. 14:787-799(2004).