Stem-loop sequence rno-mir-26a

AccessionMI0000857 (change log)
DescriptionRattus norvegicus miR-26a stem-loop
Gene family MIPF0000043; mir-26
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled mir-26_microRNA_precursor_family. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

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   a     -   g      u         c          g gca g 
5'  aggcc gug ccuugu caaguaauc aggauaggcu u   g u
    ||||| ||| |||||| ||||||||| |||||||||| |   |  
3'  uccgg cgc ggggca guucauugg ucuuauccgg g   c c
   g     g   a      c         u          g -aa c 
Get sequence
Deep sequencing
2868804 reads, 3.22e+04 reads per million, 39 experiments
Confidence Annotation confidence: high
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The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. The ends of the miRNA may be offset with respect to previous annotations.

Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr8: 127714441-127714530 [+]
Database links

Mature sequence rno-miR-26a-5p

Accession MIMAT0000796
Previous IDsrno-miR-26a

16 - 


 - 37

Get sequence
Deep sequencing2868740 reads, 39 experiments
Evidence experimental; cloned [1-3], SOLiD [4]
Predicted targets

Mature sequence rno-miR-26a-3p

Accession MIMAT0017100
Previous IDsrno-miR-26a*

55 - 


 - 75

Get sequence
Deep sequencing63 reads, 22 experiments
Evidence experimental; SOLiD [4]
Predicted targets


PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:17805466 "Cloning and identification of novel microRNAs from rat hippocampus" He X, Zhang Q, Liu Y, Pan X Acta Biochim Biophys Sin (Shanghai). 39:708-714(2007).
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).