Stem-loop sequence hsa-mir-328

AccessionMI0000804
Symbol HGNC:MIR328
DescriptionHomo sapiens miR-328 stem-loop
Gene family MIPF0000203; mir-328
Stem-loop
   --u  ag           ga     u     a aaa  g 
5'    gg  ugggggggcag  ggggc caggg g   gu c
      ||  |||||||||||  ||||| ||||| |   ||  
3'    cc  gccuucccguc  ucccg guccc c   ca a
   guc  cu           uc     -     - -ga  u 
Get sequence
Deep sequencing
4505 reads, 424 reads per million, 60 experiments
Confidence Annotation confidence: high
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Comments

This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,2], later verified in human [3].

Genome context
Coordinates (GRCh38) Overlapping transcripts
chr16: 67202321-67202395 [-]
antisense
OTTHUMT00000375094 ; HSF4-028; intron 1
OTTHUMT00000375090 ; HSF4-018; intron 3
OTTHUMT00000375091 ; HSF4-019; intron 3
OTTHUMT00000375092 ; HSF4-020; intron 3
OTTHUMT00000375084 ; HSF4-027; intron 6
OTTHUMT00000375072 ; HSF4-005; intron 8
OTTHUMT00000375076 ; HSF4-009; intron 8
OTTHUMT00000375077 ; HSF4-011; intron 8
OTTHUMT00000375079 ; HSF4-012; intron 8
OTTHUMT00000375073 ; HSF4-007; intron 9
OTTHUMT00000375074 ; HSF4-008; intron 9
OTTHUMT00000375078 ; HSF4-010; intron 9
OTTHUMT00000375080 ; HSF4-006; intron 9
OTTHUMT00000375068 ; HSF4-001; intron 9
ENST00000520304 ; HSF4-028; intron 1
ENST00000519601 ; HSF4-018; intron 3
ENST00000520833 ; HSF4-019; intron 3
ENST00000520528 ; HSF4-020; intron 3
ENST00000517750 ; HSF4-027; intron 6
ENST00000522870 ; HSF4-005; intron 8
ENST00000521314 ; HSF4-009; intron 8
ENST00000521624 ; HSF4-011; intron 8
ENST00000517685 ; HSF4-012; intron 8
ENST00000522295 ; HSF4-007; intron 9
ENST00000434833 ; HSF4-008; intron 9
ENST00000523562 ; HSF4-010; intron 9
ENST00000521374 ; HSF4-006; intron 9
ENST00000584272 ; HSF4-001; intron 9
ENST00000264009 ; HSF4-201; intron 11
ENST00000421453 ; HSF4-202; intron 11
Database links

Mature sequence hsa-miR-328-5p

Accession MIMAT0026486
Sequence

7 - 

gggggggcaggaggggcucaggg

 - 29

Get sequence
Deep sequencing6 reads, 6 experiments
Evidence experimental; Illumina [4]
Predicted targets

Mature sequence hsa-miR-328-3p

Accession MIMAT0000752
Sequence

48 - 

cuggcccucucugcccuuccgu

 - 69

Get sequence
Deep sequencing204 reads, 40 experiments
Evidence experimental; cloned [3], Illumina [4]
Validated targets
Predicted targets

References

1
PMID:14691248 "Identification of many microRNAs that copurify with polyribosomes in mammalian neurons" Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G Proc Natl Acad Sci U S A. 101:360-365(2004).
2
3
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
4
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).