Stem-loop sequence hsa-mir-330

AccessionMI0000803 (change log)
Symbol HGNC:MIR330
DescriptionHomo sapiens miR-330 stem-loop
Gene family MIPF0000200; mir-330
   cuuu   -  u a           --    -    u   ag    ugcaa 
5'     ggc ga c cugccucucug  ggcc ugug cuu  gcuc     g
       ||| || | |||||||||||  |||| |||| |||  ||||     a
3'     ccg cu g gacggagagac  ccgg acac gaa  cgag     u
   ---c   u  c c           gu    c    -   -a    ccaac 
Get sequence
Deep sequencing
44412 reads, 141 reads per million, 68 experiments
Confidence Annotation confidence: high
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This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,2], later verified in human [3].

Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr19: 45638994-45639087 [-]
OTTHUMT00000457536 ; MARK4-010; intron 1
OTTHUMT00000398356 ; PPP1R37-001; intron 1
OTTHUMT00000398357 ; PPP1R37-004; intron 1
OTTHUMT00000398362 ; PPP1R37-007; intron 1
ENST00000587566 ; MARK4-010; intron 1
ENST00000221462 ; PPP1R37-001; intron 1
ENST00000544069 ; PPP1R37-004; intron 1
ENST00000544897 ; PPP1R37-007; intron 1
ENST00000421905 ; PPP1R37-201; intron 1
Database links

Mature sequence hsa-miR-330-5p

Accession MIMAT0004693

18 - 


 - 39

Get sequence
Deep sequencing2336 reads, 57 experiments
Evidence experimental; cloned [3-4]
Database links
Predicted targets

Mature sequence hsa-miR-330-3p

Accession MIMAT0000751
Previous IDshsa-miR-330

57 - 


 - 79

Get sequence
Deep sequencing42074 reads, 67 experiments
Evidence experimental; cloned [3]
Database links
Predicted targets


PMID:14691248 "Identification of many microRNAs that copurify with polyribosomes in mammalian neurons" Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G Proc Natl Acad Sci U S A. 101:360-365(2004).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).