Stem-loop sequence hsa-mir-302c

Accession MI0000773
Symbol HGNC:MIR302C
Description Homo sapiens miR-302c stem-loop
Gene family MIPF0000071; mir-302
Stem-loop 
    ug  uu             c    -g  u 
ccuu  cu  aacauggggguac ugcu  ug g
||||  ||  ||||||||||||| ||||  || a
ggag  ga  uuguaccuucgug auga  ac a
    gu  cu             a    aa  a
Get sequence
Deep sequencing
86600 reads, 5 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr4: 113569519-113569586 [-]
sense
OTTHUMT00000365316 ; RP11-148B6.1-001; intron 1
OTTHUMT00000365318 ; RP11-148B6.1-003; intron 1
OTTHUMT00000365316 ; RP11-148B6.1-001; intron 1
OTTHUMT00000365318 ; RP11-148B6.1-003; intron 1
OTTHUMT00000365316 ; RP11-148B6.1-001; intron 1
OTTHUMT00000365318 ; RP11-148B6.1-003; intron 1
OTTHUMT00000365317 ; RP11-148B6.1-002; intron 2
OTTHUMT00000365317 ; RP11-148B6.1-002; intron 2
OTTHUMT00000365317 ; RP11-148B6.1-002; intron 2
ENST00000509938 ; RP11-148B6.1-001; intron 1
ENST00000505215 ; RP11-148B6.1-003; intron 1
ENST00000509938 ; RP11-148B6.1-001; intron 1
ENST00000505215 ; RP11-148B6.1-003; intron 1
ENST00000509938 ; RP11-148B6.1-001; intron 1
ENST00000505215 ; RP11-148B6.1-003; intron 1
ENST00000510655 ; RP11-148B6.1-002; intron 2
ENST00000510655 ; RP11-148B6.1-002; intron 2
ENST00000510655 ; RP11-148B6.1-002; intron 2
antisense
OTTHUMT00000365309 ; LARP7-013; intron 2
OTTHUMT00000365309 ; LARP7-013; intron 2
OTTHUMT00000365309 ; LARP7-013; intron 2
OTTHUMT00000365307 ; LARP7-011; intron 3
OTTHUMT00000365307 ; LARP7-011; intron 3
OTTHUMT00000365307 ; LARP7-011; intron 3
OTTHUMT00000256417 ; LARP7-001; intron 8
OTTHUMT00000363892 ; LARP7-003; intron 8
OTTHUMT00000256417 ; LARP7-001; intron 8
OTTHUMT00000363892 ; LARP7-003; intron 8
OTTHUMT00000256417 ; LARP7-001; intron 8
OTTHUMT00000363892 ; LARP7-003; intron 8
OTTHUMT00000363891 ; LARP7-002; intron 10
OTTHUMT00000363891 ; LARP7-002; intron 10
OTTHUMT00000363891 ; LARP7-002; intron 10
ENST00000511529 ; LARP7-013; intron 2
ENST00000511529 ; LARP7-013; intron 2
ENST00000511529 ; LARP7-013; intron 2
ENST00000513553 ; LARP7-011; intron 3
ENST00000513553 ; LARP7-011; intron 3
ENST00000513553 ; LARP7-011; intron 3
ENST00000344442 ; LARP7-001; intron 8
ENST00000509622 ; LARP7-003; intron 8
ENST00000324052 ; LARP7-201; intron 8
ENST00000344442 ; LARP7-001; intron 8
ENST00000509622 ; LARP7-003; intron 8
ENST00000324052 ; LARP7-201; intron 8
ENST00000344442 ; LARP7-001; intron 8
ENST00000509622 ; LARP7-003; intron 8
ENST00000324052 ; LARP7-201; intron 8
ENST00000509061 ; LARP7-002; intron 10
ENST00000509061 ; LARP7-002; intron 10
ENST00000509061 ; LARP7-002; intron 10
Clustered miRNAs
< 10kb from hsa-mir-302c
hsa-mir-302b chr4: 113569641-113569713 [-]
hsa-mir-302c chr4: 113569519-113569586 [-]
hsa-mir-302a chr4: 113569339-113569407 [-]
hsa-mir-302d chr4: 113569160-113569227 [-]
hsa-mir-367 chr4: 113569030-113569097 [-]
Database links

Mature sequence hsa-miR-302c-5p

Accession MIMAT0000716
Previous IDs hsa-miR-302c*
Sequence

8 -  

uuuaacauggggguaccugcug

 - 29

Get sequence
Deep sequencing 7 reads, 2 experiments
Evidence experimental; cloned [1-2], Northern [1]
Predicted targets

Mature sequence hsa-miR-302c-3p

Accession MIMAT0000717
Previous IDs hsa-miR-302c
Sequence

43 -  

uaagugcuuccauguuucagugg

 - 65

Get sequence
Deep sequencing 86593 reads, 5 experiments
Evidence experimental; cloned [1-2], Northern [1]
Validated targets
Predicted targets

References

1
PMID:15183728 "Human embryonic stem cells express a unique set of microRNAs" Suh MR, Lee Y, Kim JY, Kim SK, Moon SH, Lee JY, Cha KY, Chung HM, Yoon HS, Moon SY, Kim VN, Kim KS Dev Biol. 270:488-498(2004).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).