Stem-loop sequence hsa-mir-29c

AccessionMI0000735 (change log)
Symbol HGNC:MIR29C
DescriptionHomo sapiens miR-29c stem-loop
Gene family MIPF0000009; mir-29
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled mir-29_microRNA_precursor. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

The miR-29 microRNA precursor, or pre-miRNA, is a small RNA molecule in the shape of a stem-loop or hairpin. Each arm of the hairpin can be processed into one member of a closely related family of short non-coding RNAs that are involved in regulating gene expression. The processed, or "mature" products of the precursor molecule are known as microRNA (miRNA), and have been predicted or confirmed in a wide range of species (see 'MIPF0000009' in miRBase: the microRNA database).

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   a         -  ggc           ucc       ---     u 
5'  ucucuuaca ca   ugaccgauuuc   ugguguu   cagag c
    ||||||||| ||   |||||||||||   |||||||   ||||| u
3'  gggggaugu gu   auuggcuaaag   accacga   guuuu g
   a         a  ---           uuu       ucu     u 
Get sequence
Deep sequencing
2029077 reads, 1.69e+04 reads per million, 77 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].

Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr1: 207801852-207801939 [-]
OTTHUMT00000382528 ; CR1-011; intron 13
OTTHUMT00000382524 ; CR1-007; intron 37
OTTHUMT00000088499 ; CR1-002; intron 37
OTTHUMT00000088500 ; CR1-003; intron 37
OTTHUMT00000088335 ; CR1-001; intron 37
OTTHUMT00000382527 ; CR1-012; intron 45
ENST00000529814 ; CR1-011; intron 13
ENST00000367052 ; CR1-007; intron 37
ENST00000367051 ; CR1-002; intron 37
ENST00000367053 ; CR1-003; intron 37
ENST00000400960 ; CR1-001; intron 37
ENST00000367049 ; CR1-012; intron 45
Clustered miRNAs
< 10kb from hsa-mir-29c
hsa-mir-29b-2chr1: 207802443-207802523 [-]
hsa-mir-29cchr1: 207801852-207801939 [-]
Database links

Mature sequence hsa-miR-29c-5p

Accession MIMAT0004673
Previous IDshsa-miR-29c*

16 - 


 - 37

Get sequence
Deep sequencing7921 reads, 70 experiments
Evidence experimental; cloned [3]
Database links
Predicted targets

Mature sequence hsa-miR-29c-3p

Accession MIMAT0000681
Previous IDshsa-miR-29c

54 - 


 - 75

Get sequence
Deep sequencing2021155 reads, 77 experiments
Evidence experimental; cloned [2-4]
Database links
Predicted targets


PMID:12007417 "Identification of tissue-specific microRNAs from mouse" Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T Curr Biol. 12:735-739(2002).
PMID:12554860 "Numerous microRNPs in neuronal cells containing novel microRNAs" Dostie J, Mourelatos Z, Yang M, Sharma A, Dreyfuss G RNA. 9:180-186(2003).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).