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miRBase |
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Stem-loop sequence mmu-mir-107 |
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| Accession | MI0000684 | ||||
| Symbol | MGI:Mir107 | ||||
| Description | Mus musculus miR-107 stem-loop | ||||
| Gene family | MIPF0000024; mir-103 | ||||
| Community annotation |
This text is a summary paragraph taken from the Wikipedia entry entitled mir-103/107_microRNA_precursor. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ... The miR-103 microRNA precursor (homologous to miR-107), is a short non-coding RNA gene involved in gene regulation. miR-103 and miR-107 have now been predicted or experimentally confirmed in human. microRNAs are transcribed as ~70 nucleotide precursors and subsequently processed by the Dicer enzyme to give a ~22 nucleotide product. In this case the mature sequence comes from the 5' arm of the precursor. The mature products are thought to have regulatory roles through complementarity to mRNA. mir-103 and mir-107 were noted as being upregulated in obese mice and were subsequently found to have a key role in insulin sensitivity. This led to a suggestion that these microRNAs represent potential targets for the treatment of type 2 diabetes. mir-103 has also been linked with chronic pain and intestinal cell proliferation. |
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| Stem-loop |
- --c u u c u a uucucugugcuuu agcu cu uacaguguugc uug ggc u ||||||||||||| |||| || ||||||||||| ||| ||| g gagagacacgaaa ucgg ga auguuacgacg aac uug g c cua - c - - a |
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| Deep sequencing |
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| Comments |
Mouse mir-107 is predicted [2] based on homology to a cloned miR from human (MI0000114 ) [1], and later verified in mouse [3,4]. |
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| Genome context |
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| Database links |
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Mature sequence mmu-miR-107-5p |
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| Accession | MIMAT0017048 |
| Previous IDs | mmu-miR-107* |
| Sequence |
15 - agcuucuuuacaguguugccuug - 37 |
| Deep sequencing | 808 reads, 66 experiments |
| Evidence | experimental; 454 [6], Solexa [7] |
| Predicted targets |
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Mature sequence mmu-miR-107-3p |
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| Accession | MIMAT0000647 |
| Previous IDs | mmu-miR-107 |
| Sequence |
52 - agcagcauuguacagggcuauca - 74 |
| Deep sequencing | 5886412 reads, 82 experiments |
| Evidence | experimental; cloned [3-4], Solexa [5,7] |
| Predicted targets |
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References |
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| 1 |
PMID:11914277
"miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs"
Genes Dev. 16:720-728(2002).
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| 2 |
PMID:15634332
"New human and mouse microRNA genes found by homology search"
FEBS J. 272:59-73(2005).
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| 3 | |
| 4 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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| 5 |
PMID:20215419
"MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing"
Mol Hum Reprod. 16:463-471(2010).
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| 6 |
PMID:20668074
"Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68"
J Virol. 84:10266-10275(2010).
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| 7 |
PMID:20413612
"Mammalian microRNAs: experimental evaluation of novel and previously annotated genes"
Genes Dev. 24:992-1009(2010).
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