Stem-loop sequence osa-MIR164a

Accession MI0000668
Description Oryza sativa miR164a stem-loop
Gene family MIPF0000045; MIR164
Stem-loop 
       --      c u        c   g        -   auau    aucauc    --u     -u  uc u -ua  u 
gugagaa  ggaccg g uggagaag agg cacgugca ugc    guuc      aucu   cuucc  cc  c c   gc c
|||||||  |||||| | |||||||| ||| |||||||| |||    ||||      ||||   |||||  ||  | |   ||  
cacucuu  ucuggc c accucuuc ucu gugcacgu acg    caag      uaga   gaagg  gg  g g   cg c
       uu      c u        c   g        c   --cu    -----a    uuu     uu  gu u uuc  a
Get sequence
Deep sequencing
4096 reads, 4 experiments
Comments

The stem-loop sequence represented here is predicted based on homology to miRNAs cloned from Arabidopsis [1]. Its expression has not been verified in rice.

Genome context
Coordinates (MSU7) Overlapping transcripts
Chr7: 28523341-28523496 [-]
intergenic

Mature sequence osa-miR164a

Accession MIMAT0000633
Sequence

17 -  

uggagaagcagggcacgugca

 - 37

Get sequence
Deep sequencing 4075 reads, 4 experiments
Evidence by similarity; MI0000197

References

1
PMID:12101121 "MicroRNAs in plants" Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP Genes Dev. 16:1616-1626(2002).