Stem-loop sequence MI0000503

Accession MI0000503
ID cbr-mir-49
Description Caenorhabditis briggsae miR-49 stem-loop
Stem-loop 
-        cauuug     c            a u     c  c  - au 
 accgaaac      ccauc gcaguuuuuugu g gugcu cg gc c  c
 ||||||||      ||||| |||||||||||| | ||||| || || |   
 ugguuuug      gguag cgucgaagagca c cacga gc cg g  u
u        ----aa     a            - -     a  c  u au
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Comments

This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context
Coordinates (WS200) Overlapping transcripts
X: 3590186-3590281 [-]
intergenic
Gene family

MIPF0000237; mir-49

Mature sequence MIMAT0000474

Accession MIMAT0000474
ID cbr-miR-49
Sequence

61 -  

aagcaccacgagaagcugcaga

 - 82

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Evidence by similarity; MI0000020
Predicted targets

References

1
"An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans" Lau NC, Lim LP, Weinstein EG, Bartel DP Science. 294:858-862(2001).