Stem-loop sequence hsa-mir-193a

AccessionMI0000487 (change log)
Previous IDshsa-mir-193
Symbol HGNC:MIR193A
DescriptionHomo sapiens miR-193a stem-loop
Gene family MIPF0000082; mir-193
   cgaggau   a             u     cg   g  a   gggu 
5'        ggg gcugagggcuggg cuuug  ggc ag uga    g
          ||| ||||||||||||| |||||  ||| || |||     
3'        ccc cggcucuugaccc gaaac  ccg uc acu    u
   ------g   c             u     au   g  a   aggc 
Get sequence
Deep sequencing
40236 reads, 925 reads per million, 77 experiments
Confidence Annotation confidence: high
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This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1], later verified in human [2].

Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr17: 31559996-31560083 [+]
OTTHUMT00000256378 ; ASIC2-001; intron 1
OTTHUMT00000447552 ; ASIC2-003; intron 1
OTTHUMT00000447553 ; ASIC2-004; intron 1
OTTHUMT00000256379 ; ASIC2-002; intron 2
ENST00000225823 ; ASIC2-001; intron 1
ENST00000359872 ; ASIC2-003; intron 1
ENST00000579816 ; ASIC2-004; intron 1
ENST00000448983 ; ASIC2-002; intron 2
Database links

Mature sequence hsa-miR-193a-5p

Accession MIMAT0004614

21 - 


 - 42

Get sequence
Deep sequencing15190 reads, 75 experiments
Evidence experimental; cloned [2-3]
Database links
Predicted targets

Mature sequence hsa-miR-193a-3p

Accession MIMAT0000459
Previous IDshsa-miR-193;hsa-miR-193a

55 - 


 - 76

Get sequence
Deep sequencing24979 reads, 77 experiments
Evidence experimental; cloned [2-3]
Database links
Predicted targets


PMID:12554859 "New microRNAs from mouse and human" Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T RNA. 9:175-179(2003).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).