Stem-loop sequence hsa-mir-190a

Accession MI0000486
Previous IDs hsa-mir-190
Symbol HGNC:MIR190
Description Homo sapiens miR-190a stem-loop
Gene family MIPF0000076; mir-190
Stem-loop 
u     c u    - ug               ua     uuau 
 gcagg c cugu g  auauguuugauauau  gguug    u
 ||||| | |||| |  |||||||||||||||  |||||     
 cguuc g gaca c  uauacaaacuauaua  ucaac    u
c     u u    u cu               --     cuaa
Get sequence
Deep sequencing
211 reads, 27 experiments
Comments

This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1], later verified in human [2].

Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr15: 63116156-63116240 [+]
sense
OTTHUMT00000257879 ; TLN2-002; intron 22
OTTHUMT00000257879 ; TLN2-002; intron 22
OTTHUMT00000257879 ; TLN2-002; intron 22
OTTHUMT00000257881 ; TLN2-004; intron 27
OTTHUMT00000257881 ; TLN2-004; intron 27
OTTHUMT00000257881 ; TLN2-004; intron 27
OTTHUMT00000257878 ; TLN2-001; intron 51
OTTHUMT00000257878 ; TLN2-001; intron 53
OTTHUMT00000257878 ; TLN2-001; intron 53
ENST00000489129 ; TLN2-002; intron 22
ENST00000489129 ; TLN2-002; intron 22
ENST00000489129 ; TLN2-002; intron 22
ENST00000494733 ; TLN2-004; intron 27
ENST00000494733 ; TLN2-004; intron 27
ENST00000494733 ; TLN2-004; intron 27
ENST00000306829 ; TLN2-001; intron 51
ENST00000306829 ; TLN2-201; intron 51
ENST00000306829 ; TLN2-201; intron 51
ENST00000561311 ; TLN2-001; intron 53
ENST00000561311 ; TLN2-001; intron 53
Database links

Mature sequence hsa-miR-190a

Accession MIMAT0000458
Previous IDs hsa-miR-190
Sequence

15 -  

ugauauguuugauauauuaggu

 - 36

Get sequence
Deep sequencing 177 reads, 19 experiments
Evidence experimental; cloned [2]
Validated targets
Predicted targets

References

1
PMID:12554859 "New microRNAs from mouse and human" Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T RNA. 9:175-179(2003).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).