Stem-loop sequence dme-mir-276b

Accession MI0000375
Description Drosophila melanogaster miR-276b stem-loop
Gene family MIPF0000124; mir-276
Stem-loop 
aaaac   -      uuua   uc    a     a           uuc  au 
     cga agucuu    cca  agcg gguau gaguuccuacg   cu  a
     ||| ||||||    |||  |||| ||||| |||||||||||   ||   
     gcu ucagga    ggu  ucgu ccaua uucaaggaugc   ga  u
--cca   g      ----   uc    g     a           --u  cu
Get sequence
Deep sequencing
1131556 reads, 50 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
3L: 10312885-10312983 [+]
intergenic

Mature sequence dme-miR-276b-5p

Accession MIMAT0020815
Sequence

23 -  

cagcgagguauagaguuccuacg

 - 45

Get sequence
Deep sequencing 385250 reads, 50 experiments
Evidence experimental; Northern [1], 454 [3-4], Solexa [4]
Predicted targets

Mature sequence dme-miR-276b-3p

Accession MIMAT0000354
Previous IDs dme-miR-276b
Sequence

62 -  

uaggaacuuaauaccgugcucu

 - 83

Get sequence
Deep sequencing 746306 reads, 50 experiments
Evidence experimental; Northern [1], cloned [2], 454 [3-4], Solexa [4]
Predicted targets

References

1
PMID:12844358 "Computational identification of Drosophila microRNA genes" Lai EC, Tomancak P, Williams RW, Rubin GM Genome Biol. 4:R42(2003).
2
PMID:12919683 "The small RNA profile during Drosophila melanogaster development" Aravin AA, Lagos-Quintana M, Yalcin A, Zavolan M, Marks D, Snyder B, Gaasterland T, Meyer J, Tuschl T Dev Cell. 5:337-350(2003).
3
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).
4
PMID:17989255 "Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes" Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M Genome Res. 17:1865-1879(2007).