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miRBase |
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Stem-loop sequence hsa-mir-200b |
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Accession | MI0000342 (change log) | |||||||
Symbol | HGNC:MIR200B | |||||||
Description | Homo sapiens miR-200b stem-loop | |||||||
Gene family | MIPF0000019; mir-8 | |||||||
Literature search |
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680 open access papers mention hsa-mir-200b | |||||||
Stem-loop |
cca uc ag g c - ug c u ag 5' gc gggc ccgu g cauc uuac ggcag auugga gg u || |||| |||| | |||| |||| ||||| |||||| || c 3' cg cccg ggcg c guag aaug ccguc uaaucu cu a gca -u -a g a u gu a - gg |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence hsa-miR-200b-5p |
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Accession | MIMAT0004571 |
Previous IDs | hsa-miR-200b* |
Sequence |
21 - caucuuacugggcagcauugga - 42 |
Deep sequencing | 26658 reads, 120 experiments |
Evidence | experimental; cloned [4] |
Database links |
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Predicted targets |
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Mature sequence hsa-miR-200b-3p |
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Accession | MIMAT0000318 |
Previous IDs | hsa-miR-200b |
Sequence |
57 - uaauacugccugguaaugauga - 78 |
Deep sequencing | 1445603 reads, 157 experiments |
Evidence | experimental; Northern [1], cloned [2-5] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:12769849
"Computational and experimental identification of C. elegans microRNAs"
Mol Cell. 11:1253-1263(2003).
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2 |
PMID:14573789
"Reduced accumulation of specific microRNAs in colorectal neoplasia"
Mol Cancer Res. 1:882-891(2003).
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3 |
PMID:15891114
"Clustering and conservation patterns of human microRNAs"
Nucleic Acids Res. 33:2697-2706(2005).
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4 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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5 |
PMID:17616659
"Patterns of known and novel small RNAs in human cervical cancer"
Cancer Res. 67:6031-6043(2007).
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