Stem-loop sequence hsa-mir-197

Accession MI0000239
Symbol HGNC:MIR197
Description Homo sapiens miR-197 stem-loop
Gene family MIPF0000123; mir-197
Stem-loop 
        c    a       ca    ga   -   a 
ggcugugc gggu gagaggg  gugg  ggu aag g
|||||||| |||| |||||||  ||||  ||| |||  
ccgguacg ccca cucuucc  cacu  cca uuc c
        a    c       ac    uc   c   u
Get sequence
Deep sequencing
1289 reads, 28 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr1: 110141515-110141589 [+]
sense
ENST00000384976 ; MIR197-201; exon 1
ENST00000384976 ; MIR197-201; exon 1
Database links

Mature sequence hsa-miR-197-5p

Accession MIMAT0022691
Sequence

9 -  

cggguagagagggcagugggagg

 - 31

Get sequence
Deep sequencing 248 reads, 14 experiments
Evidence not experimental
Predicted targets

Mature sequence hsa-miR-197-3p

Accession MIMAT0000227
Previous IDs hsa-miR-197
Sequence

48 -  

uucaccaccuucuccacccagc

 - 69

Get sequence
Deep sequencing 1041 reads, 26 experiments
Evidence experimental; cloned [1-3]
Validated targets
Predicted targets

References

1
PMID:12554859 "New microRNAs from mouse and human" Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T RNA. 9:175-179(2003).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
3
PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).