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miRBase |
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Stem-loop sequence dme-mir-6-2 |
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Accession | MI0000125 (change log) | |||||||||||||||||
Description | Drosophila melanogaster miR-6-2 stem-loop | |||||||||||||||||
Gene family | MIPF0000119; mir-6 | |||||||||||||||||
Literature search |
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8 open access papers mention dme-mir-6-2 | |||||||||||||||||
Stem-loop |
c uu ug c u - g 5' uaacc aagggaac c cug ugauaua ua uu a ||||| |||||||| | ||| ||||||| || || 3' guugg uuuucuug g gac acuauau au aa a u uc gu - c c a |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence dme-miR-6-2-5p |
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Accession | MIMAT0020788 |
Sequence |
8 - agggaacuucugcugcugauaua - 30 |
Deep sequencing | 3129 reads, 30 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dme-miR-6-3p |
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Accession | MIMAT0000111 |
Previous IDs | dme-miR-6 |
Sequence |
48 - uaucacaguggcuguucuuuuu - 69 |
Deep sequencing | 57903 reads, 35 experiments |
Evidence | experimental; cloned [1,3], Northern [1-2], 454 [4], Illumina [5] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:11679670
"Identification of novel genes coding for small expressed RNAs"
Science. 294:853-858(2001).
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2 | |
3 |
PMID:12919683
"The small RNA profile during Drosophila melanogaster development"
Dev Cell. 5:337-350(2003).
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4 |
PMID:17989254
"Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs"
Genome Res. 17:1850-1864(2007).
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5 |
PMID:17989255
"Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes"
Genome Res. 17:1865-1879(2007).
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