miRNA Search Results

Deep sequencing reads for mature sequence MIMAT0020002
Stem-loop ID	cel-mir-4814
Mature ID	cel-miR-4814-5p
Reads	cel-miR-4814-5p cel-miR-4814-3p Count RPM (mean number of reads per million) ..................UUCUCAACCAACUUUGGCCACU............................................................ 1 1.39 ..............................................................UGGGCAAAGUUGGUUGAGAAGU................ 1 5.7 UAAACCAACUUUACCCACUUCUCAACCAACUUUGGCCACUUUUCAACUGCCAUUCACAGAAGUGGGCAAAGUUGGUUGAGAAGUGGGUAAAGUUGGGCAA ....((((((((((((((((((((((((((((((.((((((((..............)))))))).)))))))))))))))))))))))))))))).... (-66.04)

                 cel-miR-4814-5p                             cel-miR-4814-3p                           Count     RPM (mean number of reads per million)
..................UUCUCAACCAACUUUGGCCACU............................................................  1         1.39
..............................................................UGGGCAAAGUUGGUUGAGAAGU................  1         5.7
UAAACCAACUUUACCCACUUCUCAACCAACUUUGGCCACUUUUCAACUGCCAUUCACAGAAGUGGGCAAAGUUGGUUGAGAAGUGGGUAAAGUUGGGCAA
....((((((((((((((((((((((((((((((.((((((((..............)))))))).)))))))))))))))))))))))))))))).... (-66.04)

Accession

Read count

Tissue

Link

Comment

Reference

ER0000000204

adult

GEO : GSM604033

strain: N2 wild-type, age: Day 10

[ de Lencastre A et al.]

ER0000000212

whole body

GEO : GSM139137

mixed-stage

[ Ruby JG et al.]

miRBase

Deep sequencing reads for mature sequence MIMAT0020002

Filter reads

References

References
1	PMID:17174894 "Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans" Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP Cell. 127:1193-1207(2006).
2	PMID:21129974 "MicroRNAs both promote and antagonize longevity in C. elegans" de Lencastre A, Pincus Z, Zhou K, Kato M, Lee SS, Slack FJ Curr Biol. 20:2159-2168(2010).