Deep sequencing reads for mature sequence MIMAT0018741

Stem-loop ID

tca-mir-3846

Mature ID

tca-miR-3846-3p

Reads

                                 tca-miR-3846-5p                  tca-miR-3846-3p                                                     Count     RPM (mean number of reads per million)
................................UGUUCUUGGCUUAUAAGUCUUUGUGU.........................................................................  2         0.258
................................................................UAUUGACCACAAUUACGUUGCCUCAA.........................................  4         0.516
................................................................UAUUGACCACAAUUACGUUGCCUCA..........................................  2         0.258
..................................................................UUGACCACAAUUACGUUGCCUCA..........................................  8         1.03
...................................................................UGACCACAAUUACGUUGCCUCA..........................................  12        1.55
...................................................................UGACCACAAUUACGUUGCCUCAAUCA......................................  4         0.516
....................................................................GACCACAAUUACGUUGCCUCA..........................................  2         8.5
......................................................................................................UCAACUGACAUGGCAACUAAUUCUC....  4         0.516
GGAAUAGAGUUACUUCCAUUGAUGAUAGUAAAUGUUCUUGGCUUAUAAGUCUUUGUGUCAAGAAUAUUGACCACAAUUACGUUGCCUCAAUCAUCGACGUCAUCAACUGACAUGGCAACUAAUUCUCCAAU
(((...((((((.(((((((((((((.((..(((.....(((......((..(((((((((.....)))).)))))..))...))).....)))..)))))))))......)))).)).)))))))))... (-33.30)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000199	166	adult	GEO : GSM639446	genotype: wild type, gender: male and female	[ Marco A et al.]
ER0000000200	16	embryo	GEO : GSM639447	genotype: wild type, age: 0-5 days, gender: male and female	[ Marco A et al.]

References

1. PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).