Deep sequencing reads for mature sequence MIMAT0015563

Stem-loop ID

bmo-mir-3374

Mature ID

bmo-miR-3374-5p

Reads

            bmo-miR-3374-5p                            bmo-miR-3374-3p            Count     RPM (mean number of reads per million)
.UGACAGCCGUUGAAGAUGCACCAGAUG....................................................  1         0.227
.UGACAGCCGUUGAAGAUGCACCAGAUGU...................................................  1         0.233
.............AAGAUGCACCAGAUGUUG.................................................  1         0.861
......................CAGAUGUUGAGAGGCCUGAAUG....................................  1         0.233
......................CAGAUGUUGAGAGGCCUG........................................  1         0.861
..........................UGUUGAGAGGCCUGAAUGGAAACGCCA...........................  1         0.861
........................................................UGCUUUAUUUGCUCGCAC......  2         1.72
UUGACAGCCGUUGAAGAUGCACCAGAUGUUGAGAGGCCUGAAUGGAAACGCCAGGAUGCUUUAUUUGCUCGCACUCAACA
.........(((((.(.(((..((((((..(((...((((..((....)).))))...)))))))))...))))))))). (-21.00)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000268	1	whole body	GEO : GSM449725	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000269	4	anterior silk glands	GEO : GSM449726	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000270	5	posterior silk glands	GEO : GSM449727	5th-instar day-3 larvae	[ Liu S et al.]

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).