Deep sequencing reads for mature sequence MIMAT0013704

Stem-loop ID

bmo-mir-2800

Mature ID

bmo-miR-2800

Reads

            bmo-miR-2800                                                               Count     RPM (mean number of reads per million)
...UUGUAGUAGAAUAUUGUGU................................................................  1         0.233
....UGUAGUAGAAUAUUGUGUCUUGUAAA........................................................  4         1.56
.....GUAGUAGAAUAUUGUGUCUUG............................................................  1         0.233
......UAGUAGAAUAUUGUGUCUUGUAAAC.......................................................  1         0.233
......UAGUAGAAUAUUGUGUCUUGUAA.........................................................  1         0.233
.......AGUAGAAUAUUGUGUCUUGUAA.........................................................  2         0.467
..........AGAAUAUUGUGUCUUGUAAACUU.....................................................  3         0.7
..........AGAAUAUUGUGUCUUGUAAACUUA....................................................  1         0.233
..........AGAAUAUUGUGUCUUGUA..........................................................  1         0.233
................................UAAUUCAGUUGAGCACAUGAAAAG..............................  1         0.233
AAUUUGUAGUAGAAUAUUGUGUCUUGUAAACUUAAUUCAGUUGAGCACAUGAAAAGGGUUUCAGGAACCAUAUUUGUGCACAAUUU
...((((.(((((((((.((.(((((.((((((..((((((.....)).))))..))))))))))))).)))))).)))))))... (-18.00)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000268	1	whole body	GEO : GSM449725	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000269	16	anterior silk glands	GEO : GSM449726	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000270	1	posterior silk glands	GEO : GSM449727	5th-instar day-3 larvae	[ Liu S et al.]

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).